Best HRMS Software in Nigeria (2025): Top 15 HR Management Systems for Businesses

Human Resource Management Systems (HRMS) have become essential for Nigerian organizations looking to simplify HR processes, manage payroll, and improve employee engagement. From small startups to large enterprises, HR teams are now adopting digital tools to handle everything from recruitment to performance evaluation, attendance tracking, and compliance.

Nigeria’s dynamic workforce, coupled with evolving tax laws and hybrid work environments, makes HRMS software a game-changer for businesses that want to save time and ensure accuracy.

In this article, we’ll explore the 15 best HRMS software in Nigeria (2025), their top features, and why they’re worth considering — starting with the leader, Prajjo HRMS.

1. Prajjo HRMS (by Kenbox Technologies)

Website: kenboxtech.com

Overview:
Prajjo HRMS is a next-generation HR software by Kenbox Technologies that provides end-to-end HR automation for Nigerian businesses. Built with scalability in mind, it covers the entire employee lifecycle — from onboarding to exit — with compliance support and smart analytics.

Key Features:

  • Core HR: Centralized employee database, leave management, and attendance tracking.
  • Payroll Management: Automates Nigerian payroll, including PAYE tax, pension, and statutory deductions.
  • Performance Management: KPI tracking, OKR alignment, and 360° reviews.
  • Recruitment Module: Job posting, applicant tracking, and onboarding workflows.
  • Travel & Expense Management: Streamlined approvals for travel allowances.
  • Prajjo Connect App: Field team monitoring via GPS, attendance geofencing, and productivity tracking.
  • Advanced Analytics: Insightful dashboards for decision-making and HR forecasting.

Why it’s #1 in Nigeria:
✅ Customizable for Nigerian compliance
✅ Modular and mobile-friendly
✅ Supports multi-location & remote teams
✅ Affordable pricing for SMEs and enterprises


2. Zoho People

Website: zoho.com/people

Zoho People is an intuitive HRMS ideal for SMEs in Nigeria. It offers core HR, leave, time tracking, and performance management under one platform.

Key Features:

  • Centralized employee self-service portal
  • Attendance management integrated with biometrics
  • Payroll integration with Nigerian accounting software
  • Employee engagement tools (pulse surveys, announcements)

Best For: SMEs and startups that need affordable, cloud-based HR automation.


3. BambooHR

Website: bamboohr.com

BambooHR is popular among medium-sized Nigerian companies for its simplicity and strong analytics.

Key Features:

  • Onboarding and offboarding workflows
  • Time-off and approval tracking
  • Custom reports and analytics dashboards
  • Integration with Slack, Zapier, and Google Workspace

Best For: Companies focused on improving employee experience and data-driven HR.


4. SeamlessHR

Website: seamlesshr.com

SeamlessHR is a Nigeria-based HRMS with local compliance and payroll automation built for African markets.

Key Features:

  • Nigerian payroll compliance and tax computation
  • Employee performance and appraisal systems
  • Learning and development modules
  • API integration with Nigerian banks and accounting systems

Best For: Medium to large enterprises needing regional compliance.


5. SAP SuccessFactors

Website: sap.com/successfactors

A global enterprise HR suite with AI-powered analytics.

Key Features:

  • Strategic talent management and workforce analytics
  • Core HR, payroll, and employee central
  • Learning and succession planning tools

Best For: Multinational organizations in Nigeria seeking enterprise-grade HR management.


6. Gusto HR

Website: gusto.com

Gusto is known for simplifying payroll and benefits management.

Key Features:

  • Automated salary disbursement
  • Tax filings and compliance
  • Time tracking and attendance
  • Integration with accounting tools like QuickBooks

Best For: Small businesses focusing on streamlined payroll.


7. Freshteam by Freshworks

Website: freshworks.com

Freshteam offers powerful tools for recruitment, onboarding, and employee data management.

Key Features:

  • Applicant tracking system (ATS)
  • Digital onboarding checklists
  • Employee directory and document management
  • Time-off management

Best For: HR teams that prioritize efficient hiring.


8. Paycor HR

Website: paycor.com

Paycor combines HR, payroll, and analytics into one platform.

Key Features:

  • Talent management and payroll integration
  • Compliance tracking
  • Benefits administration

Best For: HR departments managing compliance and reporting.


9. IceHrm

Website: icehrm.com

IceHrm offers self-hosted and cloud-based HR solutions.

Key Features:

  • Time tracking and attendance
  • Leave management
  • Document management
  • Payroll automation

Best For: Tech companies preferring customizable HR systems.


10. Odoo HR

Website: odoo.com

Odoo HR is part of Odoo’s ERP suite and integrates HR with accounting, CRM, and inventory.

Key Features:

  • Timesheets and attendance
  • Recruitment workflows
  • Appraisal and payroll modules

Best For: Businesses using ERP and HR integration.


11. Bitrix24

Website: bitrix24.com

Bitrix24 provides a collaboration and HR solution under one platform.

Key Features:

  • Employee directory and HR database
  • Task and project management
  • Time tracking and leave requests
  • Built-in communication tools (chat, video calls)

Best For: Teams that need HR + collaboration tools together.


12. Monday.com (HR Workflows)

Website: monday.com

Monday.com isn’t a dedicated HRMS but is used by Nigerian HR teams to create customized workflows.

Key Features:

  • Custom HR dashboards
  • Applicant tracking templates
  • Task and recruitment automation

Best For: HR teams preferring flexibility and visual dashboards.


13. Keka HR

Website: keka.com

Keka HR offers modern HR, payroll, and performance management tools.

Key Features:

  • AI-based attendance tracking
  • Payroll with global compliance
  • Employee feedback and surveys

Best For: Growth-stage companies wanting end-to-end automation.


14. Deel

Website: deel.com

Deel simplifies HR for remote and global teams.

Key Features:

  • Global payroll and compliance
  • Employee onboarding for remote hires
  • Contractor and freelancer management

Best For: Companies hiring remote or international staff.


15. OrangeHRM

Website: orangehrm.com

OrangeHRM is a trusted open-source HR software with both free and paid versions.

Key Features:

  • Core HR, time tracking, and leave management
  • Recruitment and performance modules
  • Mobile app and self-service portal

Best For: Startups and NGOs looking for a cost-effective HRMS.


Conclusion

Choosing the right HRMS software in Nigeria depends on your company’s size, goals, and budget.

  • If you want a scalable, locally adapted, and feature-rich platform, Prajjo HRMS is the best overall choice.
  • For small businesses, Zoho People and IceHrm are cost-effective options.
  • Enterprises with complex operations may prefer SAP SuccessFactors or SeamlessHR.

The right HRMS will not only automate routine tasks but also improve employee satisfaction, ensure compliance, and provide actionable insights for strategic decision-making.

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